ゲノム情報科学研究教育機構  アブストラクト
Date June 11, 2013
Speaker Dr. Toby Dylan Hocking, Tokyo Institute of Technology
Title SegAnnDB: interactive web-based genomic segmentation
Abstract In cancer biology, microarray technology can be used to measure genome-wide DNA copy number. Segmentation models are used to find regions of uniform copy number, and there have been many models proposed for this task. In this presentation, I will show how visual annotations can be used to define an interpretable model for these data using a new web site, SegAnnDB. I will also briefly explain the learning algorithms, database system, interactive scatterplots, and data export features used on the web site.
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